Streptococcus pneumoniae TIGR4 (GCA_000006885)

Name: Ensembl Bacteria Streptococcus pneumoniae TIGR4 (GCA_000006885) Gene Set
Creator: TIGR
License: https://www.apache.org/licenses/LICENSE-2.0
Keywords: genebuild, transcripts, transcription, alignment, loci

Provider EMBL Nucleotide Sequence Database | Taxonomy ID 170187

About Streptococcus pneumoniae TIGR4 (GCA_000006885)

Information and statistics

View karyotype

Example region

Genome assembly: ASM688v1

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Bacteria

Example gene

Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Gene families

Pan-taxonomic tree

Comparative genomics

What can I find? Gene families based on HAMAP and PANTHER classification.

Homologues and gene trees including species across the pan-taxonomic range.

More about comparative analyses

Phylogenetic overview of gene families

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

Streptococcus pneumoniae TIGR4 (GCA_000006885)

About Streptococcus pneumoniae TIGR4 (GCA_000006885)

Genome assembly: ASM688v1

Gene annotation

Comparative genomics

Variation

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